MetaCyc Pathway: L-isoleucine biosynthesis I (from threonine) in Pseudomonas putida KT2440

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Reactions and Genes Temperature shift 30_to_4
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Threonine ammonia-lyase:
L-threonine→(Z)-2-aminobutenoate + H2O (EC 4.3.1.19)
PP_3191 +0.1
PP_3446 +0.2
PP_4430 +0.2
PP_5149 -3.3
1-aminocyclopropane-1-carboxylate deaminase:
(Z)-2-aminobutenoate→2-iminobutanoate (spontaneous) (EC 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2)
PP_1308 -0.0
PP_2009 +0.1
PP_3191 +0.1
PP_3446 +0.2
PP_4430 +0.2
PP_4594 +0.0
PP_5149 -3.3
2-iminobutanoate + H2O→2-oxobutanoate + ammonium (spontaneous) (EC 3.5.99.10; 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2)
PP_1308 -0.0
PP_2009 +0.1
PP_3191 +0.1
PP_3446 +0.2
PP_4430 +0.2
PP_4594 +0.0
PP_5149 -3.3
PP_5303 -2.8
Acetolactate synthase:
2-oxobutanoate + H+ + pyruvate→(S)-2-aceto-2-hydroxybutanoate + CO2 (EC 2.2.1.6)
PP_1157 N.D.
PP_1394 +0.0
PP_3365 +0.6
PP_3723 +0.1
PP_4679 -2.7
PP_4680 -4.7
Ketol-acid reductoisomerase (in reverse):
(S)-2-aceto-2-hydroxybutanoate + NADPH + H+→(R)-2,3-dihydroxy-3-methylpentanoate + NADP+ (EC 1.1.1.86)
PP_4678 -4.7
Dihydroxy-acid dehydratase:
(R)-2,3-dihydroxy-3-methylpentanoate→(3S)-3-methyl-2-oxopentanoate + H2O (EC 4.2.1.9)
PP_5128 -3.8
Branched-chain-amino-acid transaminase (in reverse):
(3S)-3-methyl-2-oxopentanoate + L-glutamate→L-isoleucine + 2-oxoglutarate (EC 2.6.1.42)
PP_3511 -3.2

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information