MetaCyc Pathway: gondoate biosynthesis (anaerobic) in Paraburkholderia sabiae LMG 24235

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Reactions and Genes L-Rhamnose (C)
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Beta-ketoacyl-acyl-carrier-protein synthase II:
an oleoyl-[acp] + a malonyl-[acp] + H+→an (11Z)-3-oxo-icos-11-enoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
QEN71_RS03855 +0.7
QEN71_RS03870 +0.4
QEN71_RS03875 +0.4
QEN71_RS04565 N.D.
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
an (11Z)-3-oxo-icos-11-enoyl-[acp][cytosol] + NADPH[cytosol] + H+[cytosol]→a (3R,11Z)-3-hydroxy-icos-11-enoyl-[acp][cytosol] + NADP+[cytosol] (EC 1.1.1.100)
QEN71_RS01840 -0.0
QEN71_RS02665 -0.0
QEN71_RS02810 +0.2
QEN71_RS03865 +0.8
QEN71_RS04555 N.D.
QEN71_RS07495 -0.2
QEN71_RS08210 -0.6
QEN71_RS08280 +0.2
QEN71_RS10120 -0.1
QEN71_RS11605 +0.0
QEN71_RS12650 -2.5
QEN71_RS12790 +0.4
QEN71_RS13180 +0.0
QEN71_RS15615 -0.1
QEN71_RS15890 -0.4
QEN71_RS15970 N.D.
QEN71_RS16910 -0.5
QEN71_RS16930 N.D.
QEN71_RS18940 -0.5
QEN71_RS19320 -0.1
QEN71_RS19875 -0.1
QEN71_RS22470 -0.1
QEN71_RS22960 -0.1
QEN71_RS24385 N.D.
QEN71_RS24930 +0.0
QEN71_RS25895 +0.4
QEN71_RS27100 -1.0
QEN71_RS29765 +0.2
QEN71_RS30005 -0.5
QEN71_RS30200 +0.2
QEN71_RS30445 +0.5
QEN71_RS31020 -0.4
QEN71_RS31395 +0.1
QEN71_RS32355 -0.1
QEN71_RS32915 +0.2
QEN71_RS33390 -0.6
QEN71_RS33420 -0.1
QEN71_RS33735 -1.2
QEN71_RS33860 N.D.
QEN71_RS34325 -0.0
QEN71_RS34445 -1.0
QEN71_RS35630 -0.2
QEN71_RS36135 N.D.
QEN71_RS36540 -0.1
QEN71_RS36910 -0.1
QEN71_RS37725 -0.4
QEN71_RS38560 -0.2
QEN71_RS38920 -0.1
QEN71_RS39090 -0.2
QEN71_RS39175 -0.1
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R,11Z)-3-hydroxy-icos-11-enoyl-[acp][cytosol]→a (2E,11Z)-icosa-2,11-dienoyl-[acp][cytosol] + H2O[cytosol] (EC 4.2.1.59)
QEN71_RS06475 N.D.
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E,11Z)-icosa-2,11-dienoyl-[acp][cytosol] + NADH[cytosol] + H+[cytosol]→a gondoyl-[acp][cytosol] + NAD+[cytosol] (EC 1.3.1.9)
QEN71_RS06165 N.D.
QEN71_RS13540 -0.0
QEN71_RS30430 +0.6
QEN71_RS30525 -0.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information