MetaCyc Pathway: L-tyrosine degradation I in Paraburkholderia sabiae LMG 24235

Add experiment(s):


Reactions and Genes Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
remove
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
QEN71_RS00075 +0.1
QEN71_RS01680 -0.0
QEN71_RS02890 -0.0
QEN71_RS03175 +0.1
QEN71_RS03275 +0.1
QEN71_RS04075 +0.2
QEN71_RS06560 +0.2
QEN71_RS08880 +0.1
QEN71_RS09725 +0.3
QEN71_RS10500 +0.1
QEN71_RS12205 -0.2
QEN71_RS12215 -0.5
QEN71_RS13030 -0.0
QEN71_RS17025 -0.0
QEN71_RS18160 -0.2
QEN71_RS18375 -0.4
QEN71_RS20720 +0.2
QEN71_RS21505 +0.2
QEN71_RS22410 -1.9
QEN71_RS23125 +0.1
QEN71_RS23470 -0.1
QEN71_RS23875 -0.4
QEN71_RS24010 +0.0
QEN71_RS24645 -0.1
QEN71_RS27860 -0.6
QEN71_RS30710 -0.0
QEN71_RS31640 +0.1
QEN71_RS32300 -0.4
QEN71_RS36905 +0.3
QEN71_RS38860 +0.1
QEN71_RS38900 +0.1
QEN71_RS38970 +0.4
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
QEN71_RS12110 +0.1
QEN71_RS14820 +0.1
QEN71_RS21620 -0.0
QEN71_RS28440 +0.1
Homogentisate 1,2-dioxygenase:
homogentisate + dioxygen→4-maleyl-acetoacetate + H+ (EC 1.13.11.5)
QEN71_RS26160 -0.0
Maleylacetoacetate isomerase:
4-maleyl-acetoacetate→4-fumaryl-acetoacetate (EC 5.2.1.2)
QEN71_RS01655 -0.0
QEN71_RS09680 -0.2
Fumarylacetoacetase:
4-fumaryl-acetoacetate + H2O→acetoacetate + fumarate + H+ (EC 3.7.1.2)
QEN71_RS01650 -0.2
QEN71_RS26155 +0.3
QEN71_RS35655 +0.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information