MetaCyc Pathway: formaldehyde oxidation I in Paraburkholderia sabiae LMG 24235

Add experiment(s):


Reactions and Genes Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
remove
6-phosphogluconolactonase:
6-phospho D-glucono-1,5-lactone + H2O→D-gluconate 6-phosphate + H+
(EC 3.1.1.31)
QEN71_RS03325 -1.0
QEN71_RS24525 -0.1
QEN71_RS32500 +0.3
QEN71_RS33580 +0.0
QEN71_RS41390 +0.2
D-gluconate 6-phosphate + NAD+→D-ribulose 5-phosphate + CO2 + NADH (EC 1.1.1.343)
No genes
3-hexulose-6-phosphate synthase (in reverse):
D-ribulose 5-phosphate + formaldehyde→hexulose 6-phosphate
(EC 4.1.2.43)
No genes
6-phospho-3-hexuloisomerase:
hexulose 6-phosphate→β-D-fructofuranose 6-phosphate
(EC 5.3.1.27)
No genes
Glucose-6-phosphate isomerase (in reverse):
β-D-fructofuranose 6-phosphate→α-D-glucose 6-phosphate
(EC 5.3.1.9)
QEN71_RS21935 -3.1
Glucose-6-phosphate dehydrogenase:
D-glucopyranose 6-phosphate + NADP+→6-phospho D-glucono-1,5-lactone + NADPH + H+
(EC 1.1.1.49)
QEN71_RS03330 -1.7
QEN71_RS08005 -1.1
QEN71_RS25975 -0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information