MetaCyc Pathway: alkane oxidation in Paraburkholderia sabiae LMG 24235

Add experiment(s):


Reactions and Genes Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
remove
a long-chain alkane + dioxygen + a reduced [NADPH-hemoprotein reductase]→a long-chain fatty alcohol + an oxidized [NADPH-hemoprotein reductase] + H2O
No genes
Long-chain-alcohol oxidase:
a long-chain fatty alcohol + dioxygen→a long-chain fatty aldehyde + hydrogen peroxide
(EC 1.1.3.20)
No genes
Aldehyde dehydrogenase (NAD(+)):
a fatty aldehyde + NAD+ + H2O→a fatty acid + NADH + 2 H+
(EC 1.2.1.3)
QEN71_RS00050 -1.8
QEN71_RS07095 +0.2
QEN71_RS11040 -0.3
QEN71_RS11670 -0.3
QEN71_RS13660 -0.4
QEN71_RS14810 -0.2
QEN71_RS16945 -0.5
QEN71_RS19510 +0.0
QEN71_RS20195 +1.0
QEN71_RS20440 -0.0
QEN71_RS20790 +0.1
QEN71_RS21070 -0.2
QEN71_RS23580 +0.5
QEN71_RS24925 -0.0
QEN71_RS27500 -0.0
QEN71_RS28765 +0.1
QEN71_RS31880 -0.2
QEN71_RS31965 -0.1
QEN71_RS32565 -0.4
QEN71_RS34295 +0.3
QEN71_RS35780 -0.1
QEN71_RS37085 +0.6
QEN71_RS38180 +0.0
QEN71_RS38780 +0.0
QEN71_RS39635 +0.0
QEN71_RS40180 -0.0
QEN71_RS41285 -0.0
QEN71_RS42030 -0.1
a fatty acid + NADPH + dioxygen + H+→an ω-hydroxy fatty acid + NADP+ + H2O
No genes
an ω-hydroxy fatty acid + dioxygen→an ω-oxo fatty acid + hydrogen peroxide
No genes
an ω-oxo fatty acid + NAD+ + H2O→an α,ω-dicarboxylate + NADH + 2 H+
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information