MetaCyc Pathway: superpathway of ornithine degradation in Paraburkholderia sabiae LMG 24235

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Reactions and Genes Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
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Ornithine decarboxylase:
L-ornithine + H+→putrescine + CO2 (EC 4.1.1.17)
QEN71_RS25000 N.D.
QEN71_RS33025 +0.3
Putrescine aminotransferase:
putrescine + 2-oxoglutarate→4-aminobutanal + L-glutamate (EC 2.6.1.82)
No genes
Glutamate--putrescine ligase:
putrescine + ATP + L-glutamate→γ-glutamyl-L-putrescine + ADP + H+ + phosphate (EC 6.3.1.11)
QEN71_RS12935 -1.7
Aminobutyraldehyde dehydrogenase:
4-aminobutanal + NAD+ + H2O→4-aminobutanoate + NADH + 2 H+ (EC 1.2.1.19)
QEN71_RS00050 -1.8
QEN71_RS00575 -0.4
QEN71_RS07095 +0.2
QEN71_RS11040 -0.3
QEN71_RS11670 -0.3
QEN71_RS13660 -0.4
QEN71_RS16945 -0.5
QEN71_RS19510 +0.0
QEN71_RS20195 +1.0
QEN71_RS20440 -0.0
QEN71_RS21070 -0.2
QEN71_RS23580 +0.5
QEN71_RS24925 -0.0
QEN71_RS31880 -0.2
QEN71_RS31965 -0.1
QEN71_RS32565 -0.4
QEN71_RS34295 +0.3
QEN71_RS35780 -0.1
QEN71_RS37085 +0.6
QEN71_RS38180 +0.0
QEN71_RS38780 +0.0
QEN71_RS39635 +0.0
QEN71_RS41285 -0.0
QEN71_RS42030 -0.1
4-aminobutanal→1-pyrroline + H2O (spontaneous)
No genes
γ-glutamyl-L-putrescine + dioxygen + H2O→4-(γ-L-glutamylamino)butanal + ammonium + hydrogen peroxide (EC 1.4.3.M3)
No genes
4-(γ-L-glutamylamino)butanal + NAD(P)+ + H2O→4-(γ-L-glutamylamino)butanoate + NAD(P)H + 2 H+ (EC 1.2.1.99)
No genes
Gamma-glutamyl-gamma-aminobutyrate hydrolase:
4-(γ-L-glutamylamino)butanoate + H2O→4-aminobutanoate + L-glutamate (EC 3.5.1.94)
QEN71_RS09510 -0.5
QEN71_RS12930 -0.8
QEN71_RS42520 -0.4

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information