MetaCyc Pathway: Entner-Doudoroff pathway II (non-phosphorylative) in Paraburkholderia sabiae LMG 24235

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Reactions and Genes Plant=Phaseolus_vulgaris; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
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Glucose 1-dehydrogenase (NADP(+)):
D-glucopyranose + NADP+→D-glucono-1,5-lactone + NADPH + H+ (EC 1.1.1.119; 1.1.1.360)
No genes
Gluconolactonase:
D-glucono-1,5-lactone + H2O→D-gluconate + H+ (spontaneous) (EC 3.1.1.17)
QEN71_RS13590 +0.2
QEN71_RS18015 -0.1
QEN71_RS18960 +0.0
QEN71_RS38785 +0.1
D-gluconate→2-dehydro-3-deoxy-D-gluconate + H2O (EC 4.2.1.140; 4.2.1.39)
QEN71_RS02295 -0.3
QEN71_RS14610 +0.1
QEN71_RS30680 -0.1
QEN71_RS39295 +0.4
2-dehydro-3-deoxy-D-gluconate→D-glyceraldehyde + pyruvate (EC 4.1.2.51)
No genes
D-glyceraldehyde + an oxidized electron carrier + H2O→D-glycerate + a reduced two electron carrier + H+ (EC 1.2.99.8)
QEN71_RS00050 -1.8
QEN71_RS07095 +0.2
QEN71_RS11040 -0.3
QEN71_RS11670 -0.3
QEN71_RS13660 -0.4
QEN71_RS16945 -0.5
QEN71_RS19510 +0.0
QEN71_RS20195 +1.0
QEN71_RS20440 -0.0
QEN71_RS21070 -0.2
QEN71_RS23580 +0.5
QEN71_RS24925 -0.0
QEN71_RS31880 -0.2
QEN71_RS31965 -0.1
QEN71_RS32565 -0.4
QEN71_RS34295 +0.3
QEN71_RS35780 -0.1
QEN71_RS37085 +0.6
QEN71_RS38180 +0.0
QEN71_RS38780 +0.0
QEN71_RS39635 +0.0
QEN71_RS41285 -0.0
QEN71_RS42030 -0.1
D-glycerate + ATP→2-phospho-D-glycerate + ADP + H+ (EC 2.7.1.165)
QEN71_RS12190 +0.3
Phosphopyruvate hydratase:
2-phospho-D-glycerate→phosphoenolpyruvate + H2O (EC 4.2.1.11)
QEN71_RS05880 N.D.
QEN71_RS41510 +0.2
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
QEN71_RS02430 +0.1
QEN71_RS12195 +0.1
QEN71_RS41440 +0.2
Pyruvate synthase:
pyruvate + coenzyme A + 2 an oxidized ferredoxin [iron-sulfur] cluster→acetyl-CoA + CO2 + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster (EC 1.2.7.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information