MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Paraburkholderia sabiae LMG 24235

Add experiment(s):


Reactions and Genes Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
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geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
QEN71_RS00075 -0.1
QEN71_RS01680 +0.0
QEN71_RS02890 -0.0
QEN71_RS03175 +0.2
QEN71_RS03275 +0.1
QEN71_RS04075 +0.1
QEN71_RS06560 +0.0
QEN71_RS08880 +0.0
QEN71_RS09725 -0.2
QEN71_RS10500 +0.1
QEN71_RS12205 +0.1
QEN71_RS12215 +0.1
QEN71_RS13030 -0.1
QEN71_RS17025 -0.0
QEN71_RS18160 -0.1
QEN71_RS18375 -0.0
QEN71_RS20720 -0.4
QEN71_RS21505 +0.1
QEN71_RS22410 -0.3
QEN71_RS23125 +0.1
QEN71_RS23470 +0.1
QEN71_RS23875 -1.2
QEN71_RS24010 +0.1
QEN71_RS24645 -0.1
QEN71_RS27860 -0.1
QEN71_RS30710 -0.8
QEN71_RS31640 -1.8
QEN71_RS32300 -0.2
QEN71_RS36905 +0.2
QEN71_RS38860 +0.1
QEN71_RS38900 +0.4
QEN71_RS38970 +0.0
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
QEN71_RS12110 +0.4
QEN71_RS14820 +0.0
QEN71_RS21620 +0.1
QEN71_RS28440 -0.1
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information