MetaCyc Pathway: superpathway of glyoxylate cycle and fatty acid degradation in Acinetobacter radioresistens SK82

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Reactions and Genes L-tyrosine (C)
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a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate
No genes
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide
(EC 1.3.3.6)
No genes
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
MPMX26_00226 -0.5
MPMX26_00534 +0.2
MPMX26_00610 +0.7
MPMX26_01232 -3.4
MPMX26_01501 N.D.
MPMX26_01545 N.D.
MPMX26_01546 N.D.
MPMX26_01555 N.D.
MPMX26_02179 +0.1
MPMX26_03058 -0.5
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+
(EC 1.1.1.35)
MPMX26_00226 -0.5
MPMX26_00610 +0.7
MPMX26_01177 N.D.
MPMX26_03059 -1.7
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA
(EC 2.3.1.16)
MPMX26_00225 -0.2
MPMX26_00611 N.D.
MPMX26_00837 N.D.
MPMX26_01592 N.D.
MPMX26_01701 -2.2
MPMX26_01750 +0.2
MPMX26_02383 -1.1
MPMX26_02495 +0.2
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+
(EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
MPMX26_00746 N.D.
Aconitate hydratase:
citrate→cis-aconitate + H2O
(EC 4.2.1.3)
MPMX26_00480 N.D.
MPMX26_01191 N.D.
MPMX26_02481 -2.7
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate
(EC 4.2.1.3)
MPMX26_00480 N.D.
MPMX26_01191 N.D.
MPMX26_02481 -2.7
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate
(EC 4.1.3.1)
MPMX26_02319 -6.3
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+
(EC 2.3.3.9)
MPMX26_01247 -5.6
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol
(EC 1.3.5.1)
MPMX26_00748 N.D.
MPMX26_00750 N.D.
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate
(EC 4.2.1.2)
MPMX26_00411 -1.4
MPMX26_01446 -1.4
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+
(EC 1.1.1.37; 1.1.1.38)
MPMX26_00080 +0.1
MPMX26_02664 N.D.
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2
(EC 4.1.1.49)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information