MetaCyc Pathway: superpathway of glyoxylate cycle and fatty acid degradation in Variovorax sp. OAS795

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Reactions and Genes L-Histidine (C)
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a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate
No genes
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide
(EC 1.3.3.6)
No genes
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
ABID97_RS00815 -0.2
ABID97_RS01435 -0.3
ABID97_RS02880 -0.1
ABID97_RS03115 -0.6
ABID97_RS04670 +0.2
ABID97_RS05865 -0.7
ABID97_RS05900 +0.1
ABID97_RS05990 +0.0
ABID97_RS06010 -0.1
ABID97_RS07755 +0.3
ABID97_RS10620 N.D.
ABID97_RS14445 +0.1
ABID97_RS15740 -0.4
ABID97_RS17005 -0.1
ABID97_RS17010 -0.2
ABID97_RS17470 -0.1
ABID97_RS18490 -0.3
ABID97_RS18595 N.D.
ABID97_RS18600 +0.3
ABID97_RS18605 N.D.
ABID97_RS18635 +0.1
ABID97_RS19410 +0.9
ABID97_RS20990 +0.3
ABID97_RS22770 +0.1
ABID97_RS24015 +0.4
ABID97_RS24805 +1.1
ABID97_RS26735 N.D.
ABID97_RS27490 +0.7
ABID97_RS27535 +0.6
ABID97_RS27555 +0.0
ABID97_RS27620 N.D.
ABID97_RS28260 N.D.
ABID97_RS28410 N.D.
ABID97_RS29050 -0.5
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+
(EC 1.1.1.35)
ABID97_RS03030 -0.3
ABID97_RS05865 -0.7
ABID97_RS06010 -0.1
ABID97_RS08805 +0.0
ABID97_RS10560 +0.3
ABID97_RS15740 -0.4
ABID97_RS17005 -0.1
ABID97_RS18595 N.D.
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA
(EC 2.3.1.16)
ABID97_RS04675 +0.0
ABID97_RS05875 N.D.
ABID97_RS06005 +0.0
ABID97_RS10975 +0.2
ABID97_RS11335 -0.5
ABID97_RS11380 -0.4
ABID97_RS12420 N.D.
ABID97_RS15750 -0.2
ABID97_RS18615 -0.1
ABID97_RS18775 +0.6
ABID97_RS20240 -0.1
ABID97_RS24190 +0.1
ABID97_RS25195 +0.1
ABID97_RS26575 N.D.
ABID97_RS27835 +0.1
ABID97_RS28230 -1.4
ABID97_RS28270 +0.8
ABID97_RS28430 -0.0
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+
(EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
ABID97_RS01110 +0.3
ABID97_RS01120 +0.3
ABID97_RS07945 -1.0
ABID97_RS08480 +0.9
ABID97_RS26895 +0.6
ABID97_RS28890 +0.1
Aconitate hydratase:
citrate→cis-aconitate + H2O
(EC 4.2.1.3)
ABID97_RS08535 N.D.
ABID97_RS08550 +3.6
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate
(EC 4.2.1.3)
ABID97_RS08535 N.D.
ABID97_RS08550 +3.6
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate
(EC 4.1.3.1)
ABID97_RS11115 -0.9
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+
(EC 2.3.3.9)
ABID97_RS04710 -1.7
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol
(EC 1.3.5.1)
ABID97_RS08495 N.D.
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate
(EC 4.2.1.2)
ABID97_RS17545 +2.2
ABID97_RS17550 -0.6
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+
(EC 1.1.1.37; 1.1.1.38)
ABID97_RS05795 +0.0
ABID97_RS08515 N.D.
ABID97_RS17295 +0.0
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2
(EC 4.1.1.49)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information