MetaCyc Pathway: L-lyxonate degradation in Variovorax sp. OAS795

Add experiment(s):


Reactions and Genes L-Arabinose (C)
remove
L-lyxonate→2-dehydro-3-deoxy-L-pentonate + H2O (EC 4.2.1.176)
ABID97_RS09975 +0.3
2-dehydro-3-deoxy-L-arabinonate dehydratase:
2-dehydro-3-deoxy-L-pentonate→2,5-dioxopentanoate + H2O (EC 4.2.1.43)
ABID97_RS06875 -1.7
ABID97_RS09965 +0.0
2,5-dioxovalerate dehydrogenase:
2,5-dioxopentanoate + NAD(P)+ + H2O→2-oxoglutarate + NAD(P)H + 2 H+ (EC 1.2.1.26)
ABID97_RS06830 +0.5
ABID97_RS09960 N.D.
ABID97_RS10380 N.D.
ABID97_RS22175 -5.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information