MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Variovorax sp. OAS795

Reactions and Genes	L-Threonine (C)
	remove
Aspartate transaminase: L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
ABID97_RS04080	-0.3
ABID97_RS05635	-0.3
ABID97_RS06550	+0.0
ABID97_RS10885	-1.9
ABID97_RS13335	-0.0
ABID97_RS16605	-1.0
ABID97_RS17960	-0.5
ABID97_RS18035	+0.4
ABID97_RS20530	-0.3
ABID97_RS21960	+0.5
ABID97_RS24840	-0.0
ABID97_RS27360	+0.1
ABID97_RS27595	+0.2
ABID97_RS27655	-0.3
Indolepyruvate decarboxylase: (indol-3-yl)pyruvate + H⁺→(indol-3-yl)acetaldehyde + CO₂ (EC 4.1.1.74)
No genes
Indole-3-acetaldehyde oxidase: (indol-3-yl)acetaldehyde + dioxygen + H₂O→(indol-3-yl)acetate + hydrogen peroxide + H⁺ (EC 1.2.3.7)
No genes

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Pathway details at MetaCyc
Fitness data for 14 genes
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All MetaCyc pathways for Variovorax sp. OAS795

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information