MetaCyc Pathway: 3-methyl-branched fatty acid α-oxidation in Variovorax sp. OAS795

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Reactions and Genes Tween 20 (C)
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Long-chain-fatty-acid--CoA ligase:
a 3-methyl-branched 2,3,4-saturated fatty acid + ATP + coenzyme A→a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA + AMP + diphosphate
(EC 6.2.1.3)
ABID97_RS00120 -0.1
ABID97_RS00770 -0.1
ABID97_RS01075 -0.1
ABID97_RS04445 -2.8
ABID97_RS11345 +0.1
ABID97_RS25135 +0.0
ABID97_RS27890 -0.1
a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA + 2-oxoglutarate + dioxygen→a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA + CO2 + succinate
No genes
a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA→a 2-methyl branched 2,3,4-saturated fatty aldehyde + formyl-CoA (EC 4.1.2.63)
No genes
Formyl-CoA hydrolase:
formyl-CoA + H2O→formate + coenzyme A + H+
(EC 3.1.2.10)
No genes
Aldehyde dehydrogenase (NAD(+)):
a 2-methyl branched 2,3,4-saturated fatty aldehyde + NAD+ + H2O→a 2-methyl branched 2,3,4-saturated fatty acid + NADH + 2 H+
(EC 1.2.1.3)
ABID97_RS01290 -0.0
ABID97_RS04070 +0.2
ABID97_RS06830 +0.0
ABID97_RS09960 N.D.
ABID97_RS10380 N.D.
ABID97_RS13510 -0.1
ABID97_RS13535 -0.4
ABID97_RS15020 +0.1
ABID97_RS18885 -0.0
ABID97_RS22830 +0.1
ABID97_RS25410 N.D.
ABID97_RS25710 N.D.
ABID97_RS25990 -0.3
ABID97_RS26110 -0.1
ABID97_RS28560 N.D.
ABID97_RS28760 -0.3
ABID97_RS29450 +0.0
Long-chain-fatty-acid--CoA ligase:
a 2-methyl branched 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2-methyl branched 2,3,4-saturated fatty acyl-CoA + AMP + diphosphate
(EC 6.2.1.3)
ABID97_RS00120 -0.1
ABID97_RS00770 -0.1
ABID97_RS01075 -0.1
ABID97_RS04445 -2.8
ABID97_RS11345 +0.1
ABID97_RS25135 +0.0
ABID97_RS27890 -0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information