MetaCyc Pathway: glycolate and glyoxylate degradation II in Escherichia coli BW25113
| Reactions and Genes | D-Ribose (C) |
|---|---|
| remove | |
| Glycolate dehydrogenase: glycolate[in] + an electron-transfer quinone→glyoxylate[in] + an electron-transfer quinol (EC 1.1.99.14) | |
| b1687 (ydiJ) | -0.8 |
| b2979 (glcD) | -0.2 |
| b4467 (glcF) | -0.3 |
| b4468 (glcE) | -0.4 |
| Malate synthase: glyoxylate + acetyl-CoA + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) | |
| b2976 (glcB) | -0.1 |
| b4014 (aceB) | +1.1 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information