MetaCyc Pathway: choline-O-sulfate degradation in Variovorax sp. OAS795

Reactions and Genes	2-Deoxy-D-Ribose (C)
Choline-sulfatase: choline sulfate + H2O→choline + H+ + sulfate (EC 3.1.6.6)
ABID97_RS20770	-0.3
Choline dehydrogenase: choline + an oxidized electron carrier→betaine aldehyde + a reduced two electron carrier (EC 1.1.99.1)
ABID97_RS04020	-1.2
ABID97_RS18845	-0.1
ABID97_RS18850	N.D.
ABID97_RS18855	+0.2
ABID97_RS25415	+0.1
ABID97_RS26035	+0.3
ABID97_RS28745	+2.2
ABID97_RS29430	-0.8
Betaine-aldehyde dehydrogenase: betaine aldehyde + NAD+ + H2O→glycine betaine + NADH + 2 H+ (EC 1.2.1.8)
ABID97_RS18885	-0.5

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information