MetaCyc Pathway: glycine degradation in Pseudomonas simiae WCS417

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Reactions and Genes Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
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glycine + NAD+ + a tetrahydrofolate→ammonium + a 5,10-methylenetetrahydrofolate + CO2 + NADH (EC 1.4.1.27)
PS417_08905 N.D.
PS417_22360 +0.4
PS417_27255 -0.3
Glycine hydroxymethyltransferase (in reverse):
glycine + a 5,10-methylenetetrahydrofolate + H2O→L-serine + a tetrahydrofolate (EC 2.1.2.1)
PS417_24275 -1.0
PS417_24280 N.D.
PS417_26195 +0.2
L-serine ammonia-lyase:
L-serine→ammonium + pyruvate (EC 4.3.1.17)
PS417_05075 -3.4
PS417_22365 -0.1
PS417_26310 +0.2

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information