MetaCyc Pathway: adenosine nucleotides degradation I in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
remove
Adenosine-phosphate deaminase:
AMP + H+ + H2O→IMP + ammonium
(EC 3.5.4.17; 3.5.4.6)
No genes
IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+
(EC 1.1.1.205)
PS417_10545 N.D.
PS417_23075 N.D.
5'-nucleotidase:
IMP + H2O→inosine + phosphate
(EC 3.1.3.5; 3.1.3.99)
PS417_06350 -1.8
PS417_08450 -0.1
PS417_01285 -0.4
Inosine nucleosidase:
inosine + H2O→hypoxanthine + D-ribofuranose
(EC 3.2.2.2)
PS417_12990 -0.0
PS417_18375 -0.0
5'-nucleotidase:
XMP + H2O→xanthosine + phosphate
(EC 3.1.3.5)
PS417_06350 -1.8
PS417_08450 -0.1
Xanthine dehydrogenase:
hypoxanthine + NAD+ + H2O→xanthine + NADH + H+
(EC 1.17.1.4)
PS417_20885 -0.1
PS417_20890 +0.0
PS417_24360 -0.4
PS417_24365 +0.2
Purine nucleosidase:
xanthosine + H2O→xanthine + D-ribofuranose
(EC 3.2.2.1)
PS417_12990 -0.0
PS417_18375 -0.0
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+
(EC 1.17.1.4)
PS417_20885 -0.1
PS417_20890 +0.0
PS417_24360 -0.4
PS417_24365 +0.2

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information