MetaCyc Pathway: indole-3-acetate biosynthesis III (bacteria) in Pseudomonas simiae WCS417

Add experiment(s):


Reactions and Genes Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
remove
Tryptophan 2-monooxygenase:
L-tryptophan + dioxygen→(indol-3-yl)acetamide + CO2 + H2O (EC 1.13.12.3)
PS417_25910 -2.0
Amidase:
(indol-3-yl)acetamide + H2O→(indol-3-yl)acetate + ammonium (EC 3.5.1.4)
PS417_10630 -0.2
PS417_11660 +0.2
PS417_14835 -0.5
PS417_18230 +0.0
PS417_23115 -0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information