| Reactions and Genes | Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 |
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5-formyltetrahydrofolate cyclo-ligase:
a (6S)-5-formyltetrahydrofolate + ATP→a 5,10-methenyltetrahydrofolate + ADP + phosphate (EC 6.3.3.2) |
| PS417_27305 | -3.5 |
Dihydrofolate reductase (in reverse):
a 7,8-dihydrofolate + NADPH + H+→a tetrahydrofolate + NADP+ (EC 1.5.1.3) |
| PS417_16880 | -0.2 |
| PS417_23490 | +0.4 |
| PS417_26905 | N.D. |
| a tetrahydrofolate + glycine + NAD+→a 5,10-methylenetetrahydrofolate + ammonium + CO2 + NADH (EC 1.4.1.27) |
| PS417_08905 | N.D. |
| PS417_22360 | -4.3 |
| PS417_27255 | +0.1 |
Glycine hydroxymethyltransferase (in reverse):
a 5,10-methylenetetrahydrofolate + glycine + H2O→a tetrahydrofolate + L-serine (EC 2.1.2.1) |
| PS417_24275 | -1.0 |
| PS417_24280 | N.D. |
| PS417_26195 | -0.4 |
Methionine synthase:
a 5-methyltetrahydrofolate + L-homocysteine→a tetrahydrofolate + L-methionine (EC 2.1.1.13) |
| PS417_12310 | -4.7 |
Methylenetetrahydrofolate dehydrogenase (NADP(+)):
a 5,10-methylenetetrahydrofolate + NADP+→a 5,10-methenyltetrahydrofolate + NADPH (EC 1.5.1.5) |
| PS417_17265 | N.D. |
| a 5,10-methylenetetrahydrofolate + NADH + H+→a 5-methyltetrahydrofolate + NAD+ (EC 1.5.1.54) |
| PS417_26510 | +0.7 |
Thymidylate synthase:
a 5,10-methylenetetrahydrofolate + dUMP→a 7,8-dihydrofolate + dTMP (EC 2.1.1.45) |
| PS417_26965 | N.D. |
Methenyltetrahydrofolate cyclohydrolase:
a 5,10-methenyltetrahydrofolate + H2O→an N10-formyltetrahydrofolate + H+ (EC 3.5.4.9) |
| PS417_17265 | N.D. |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information