MetaCyc Pathway: pyridoxal 5'-phosphate biosynthesis I in Pseudomonas simiae WCS417

Reactions and Genes	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
1-deoxy-D-xylulose-5-phosphate synthase: D-glyceraldehyde 3-phosphate + pyruvate + H+→1-deoxy-D-xylulose 5-phosphate + CO2 (EC 2.2.1.7)
PS417_25205	N.D.
Erythrose-4-phosphate dehydrogenase: D-erythrose 4-phosphate + NAD+ + H2O→4-phospho-D-erythronate + NADH + 2 H+ (EC 1.2.1.72)
PS417_22695	-2.2
PS417_26435	N.D.
4-phosphoerythronate dehydrogenase: 4-phospho-D-erythronate + NAD+→(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate + NADH + H+ (EC 1.1.1.290)
PS417_07535	N.D.
Phosphoserine transaminase (in reverse): (3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate + L-glutamate→4-phosphooxy-L-threonine + 2-oxoglutarate (EC 2.6.1.52)
PS417_08120	N.D.
4-hydroxythreonine-4-phosphate dehydrogenase: 4-phosphooxy-L-threonine + NAD+→3-amino-1-hydroxyacetone 1-phosphate + CO2 + NADH (EC 1.1.1.262)
PS417_25805	N.D.
Pyridoxine 5'-phosphate synthase: 3-amino-1-hydroxyacetone 1-phosphate + 1-deoxy-D-xylulose 5-phosphate→pyridoxine 5'-phosphate + H+ + phosphate + 2 H2O (EC 2.6.99.2)
PS417_05205	N.D.
Pyridoxal 5'-phosphate synthase: pyridoxine 5'-phosphate + dioxygen→pyridoxal 5'-phosphate + hydrogen peroxide (EC 1.4.3.5)
PS417_06535	N.D.
PS417_15770	-0.2

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information