| Reactions and Genes | Carbon source L-Ornithine 5 mM |
|---|
| remove |
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1) |
| PS417_08560 | +0.2 |
| PS417_09070 | -0.0 |
| PS417_09120 | +0.0 |
| PS417_11840 | -0.2 |
| PS417_12775 | -0.0 |
| PS417_12985 | +0.0 |
| PS417_13545 | -0.3 |
| PS417_14865 | -0.1 |
| PS417_15040 | -0.0 |
| PS417_15990 | -0.4 |
| PS417_19025 | +0.1 |
| PS417_19385 | -0.3 |
| PS417_19910 | -0.1 |
| PS417_21030 | +0.2 |
| PS417_21275 | +0.0 |
| PS417_23120 | +0.0 |
| PS417_27730 | +0.1 |
| PS417_28165 | +0.0 |
Aspartate kinase:
L-aspartate + ATP→L-aspartyl-4-phosphate + ADP (EC 2.7.2.4) |
| PS417_21655 | -0.8 |
Aspartate-semialdehyde dehydrogenase (in reverse):
L-aspartyl-4-phosphate + NADPH + H+→L-aspartate 4-semialdehyde + NADP+ + phosphate (EC 1.2.1.11) |
| PS417_06650 | N.D. |
| PS417_18575 | -0.0 |
| PS417_18580 | N.D. |
| L-aspartate 4-semialdehyde + pyruvate→(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H+ + H2O (EC 4.3.3.7) |
| PS417_06885 | -0.1 |
| PS417_07165 | -1.1 |
| PS417_14640 | N.D. |
Homoserine dehydrogenase (in reverse):
L-aspartate 4-semialdehyde + NAD(P)H + H+→L-homoserine + NAD(P)+ (EC 1.1.1.3) |
| PS417_22885 | N.D. |
Homoserine kinase:
L-homoserine + ATP→O-phospho-L-homoserine + ADP + H+ (EC 2.7.1.39) |
| PS417_21120 | -0.2 |
| PS417_00395 | N.D. |
Homoserine O-succinyltransferase:
L-homoserine + succinyl-CoA→O-succinyl-L-homoserine + coenzyme A (EC 2.3.1.46) |
| No genes |
| (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+→(S)-2,3,4,5-tetrahydrodipicolinate + NAD(P)+ + H2O (EC 1.17.1.8) |
| PS417_24050 | N.D. |
Cystathionine gamma-synthase:
O-succinyl-L-homoserine + L-cysteine→L-cystathionine + H+ + succinate (EC 2.5.1.48) |
| PS417_18530 | -2.6 |
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase:
(S)-2,3,4,5-tetrahydrodipicolinate + succinyl-CoA + H2O→N-succinyl-2-amino-6-ketopimelate + coenzyme A (EC 2.3.1.117) |
| PS417_06180 | N.D. |
Threonine synthase:
O-phospho-L-homoserine + H2O→L-threonine + phosphate (EC 4.2.3.1) |
| PS417_22880 | N.D. |
Cysteine-S-conjugate beta-lyase:
L-cystathionine + H2O→L-homocysteine + ammonium + pyruvate (EC 4.4.1.13) |
| No genes |
Succinyldiaminopimelate transaminase (in reverse):
N-succinyl-2-amino-6-ketopimelate + L-glutamate→N-succinyl-L,L-2,6-diaminopimelate + 2-oxoglutarate (EC 2.6.1.17) |
| PS417_06195 | +0.2 |
| PS417_21710 | -1.9 |
| PS417_25950 | +0.1 |
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase:
L-homocysteine + 5-methyltetrahydropteroyl tri-L-glutamate→L-methionine + tetrahydropteroyl tri-L-glutamate (EC 2.1.1.14) |
| PS417_18775 | +0.3 |
Methionine synthase:
L-homocysteine + a 5-methyltetrahydrofolate→L-methionine + a tetrahydrofolate (EC 2.1.1.13) |
| PS417_12310 | -1.3 |
Succinyl-diaminopimelate desuccinylase:
N-succinyl-L,L-2,6-diaminopimelate + H2O→L,L-diaminopimelate + succinate (EC 3.5.1.18) |
| PS417_06155 | N.D. |
Diaminopimelate epimerase:
L,L-diaminopimelate→meso-diaminopimelate (EC 5.1.1.7) |
| PS417_09775 | +0.3 |
| PS417_12450 | +0.1 |
| PS417_15365 | +0.3 |
| PS417_22110 | N.D. |
| PS417_27585 | -0.3 |
Diaminopimelate decarboxylase:
meso-diaminopimelate + H+→L-lysine + CO2 (EC 4.1.1.20) |
| PS417_27580 | N.D. |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information