MetaCyc Pathway: fatty acid salvage in Pseudomonas putida KT2440

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Reactions and Genes Vanillic Acid (C)
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Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
PP_3458 +0.2
PP_4549 -0.3
PP_4550 -0.1
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
PP_0368 -1.9
PP_0370 +0.0
PP_1893 +0.0
PP_2048 -0.0
PP_3354 -0.1
PP_3554 +0.0
PP_4780 -0.1
PP_4948 +0.1
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
PP_1412 +0.2
PP_2047 +0.0
PP_2136 -1.2
PP_3726 +0.4
PP_3732 +0.2
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
PP_2047 +0.0
PP_2136 -1.2
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
PP_0582 +0.0
PP_1377 -6.6
PP_2051 +0.2
PP_2137 -0.5
PP_2215 -0.1
PP_3280 +0.2
PP_3355 -0.2
PP_3754 +0.0
PP_4636 -0.1
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
PP_4545 +0.4

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information