MetaCyc Pathway: L-aspartate degradation III (anaerobic) in Escherichia coli BW25113
| Reactions and Genes | Trimethoprim 0.0025 mM |
|---|---|
| remove | |
| L-aspartate[out] + succinate[in]→L-aspartate[in] + succinate[out] | |
| b4123 (dcuB) | +0.1 |
| b4138 (dcuA) | -1.1 |
| Aspartate ammonia-lyase: L-aspartate→ammonium + fumarate (EC 4.3.1.1) | |
| b4139 (aspA) | +0.8 |
| Glutamate--ammonia ligase: ammonium + ATP + L-glutamate→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2) | |
| b3870 (glnA) | +0.4 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information