MetaCyc Pathway: D-arabinose degradation II in Agrobacterium fabrum C58

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Reactions and Genes 1,4-Butanediol (C)
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Arabinose isomerase:
D-arabinopyranose→D-ribulose (EC 5.3.1.3)
No genes
L-fuculokinase:
D-ribulose + ATP→D-ribulose 1-phosphate + ADP + H+ (EC 2.7.1.51)
No genes
L-fuculose-phosphate aldolase:
D-ribulose 1-phosphate→glycerone phosphate + glycolaldehyde (EC 4.1.2.17)
No genes
Glycolaldehyde dehydrogenase:
glycolaldehyde + NAD+ + H2O→glycolate + NADH + 2 H+ (EC 1.2.1.21)
Atu2139 +0.1
Atu2224 -4.2
Atu3401 +0.1
Atu3403 -0.1
Atu3950 -0.0
Atu3959 +0.2
Atu4241 +0.1
Atu4849 +0.0
Atu5228 N.D.

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information