MetaCyc Pathway: putrescine biosynthesis II in Pseudomonas putida KT2440

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Reactions and Genes 1-Pentanol (C)
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Arginine decarboxylase:
L-arginine + H+→agmatine + CO2 (EC 4.1.1.19)
PP_0567 -1.0
PP_0864 -0.2
Agmatine deiminase:
agmatine + H2O→N-carbamoylputrescine + ammonium (EC 3.5.3.12)
PP_0266 -1.2
N-carbamoylputrescine amidase:
N-carbamoylputrescine + 2 H+ + H2O→putrescine + ammonium + CO2 (EC 3.5.1.53)
PP_2932 -1.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information