Fitness data for RPSI07_RS13830 in Ralstonia solanacearum PSI07

oxygen-independent coproporphyrinogen III oxidase-like protein
SEED: Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB
KEGG: oxygen-independent coproporphyrinogen III oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.4 -4.2 compare
cpg CPG -1.0 -4.3 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.0 -3.4 compare
m63_quarter_strength M63_quarter_strength -1.0 -4.4 compare
cpg CPG -1.0 -4.7 compare
stress SMSA with Ralstonia_antibiotic_mix -0.8 -2.7 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.7 -3.5 compare
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 -2.8 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.6 -2.5 compare
smsa no antibiotic control SMSA no antibiotic control -0.6 -2.2 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 -2.3 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.6 -2.7 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -2.2 compare
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.6 -2.3 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -1.3 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.5 -2.4 compare
cpg no stress control CPG no stress control -0.5 -2.1 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.5 -1.6 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.7 +1.2 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.7 +2.1 compare