Fitness data for RPSI07_RS10490 in Ralstonia solanacearum PSI07

PDZ domain-containing protein
SEED: Outer membrane stress sensor protease DegS
KEGG: serine protease DegQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.0 -3.2 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.9 -1.3 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.8 -1.2 compare
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -1.7 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.7 -1.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.6 -0.8 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.6 +1.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +0.6 +3.1 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.6 +0.9 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.7 +0.8 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.7 +1.9 compare
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.7 +1.6 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.7 +0.9 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.9 +0.9 compare
cpg no stress control CPG no stress control +0.9 +1.2 compare
stress SMSA with Ralstonia_antibiotic_mix +0.9 +1.1 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +1.1 +1.4 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +1.1 +1.4 compare
smsa no antibiotic control SMSA no antibiotic control +1.2 +1.6 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet +1.4 +1.8 compare