Fitness data for RPSI07_RS06205 in Ralstonia solanacearum PSI07

shikimate dehydrogenase
SEED: Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25)
KEGG: shikimate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
cpg no stress control CPG no stress control -0.7 -2.5 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 -2.7 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.6 -1.5 compare
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -1.5 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.5 -1.8 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -1.6 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -2.5 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.5 -1.5 compare
stress SMSA with Ralstonia_antibiotic_mix -0.4 -1.7 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -2.2 compare
smsa no antibiotic control SMSA no antibiotic control -0.4 -1.3 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 -2.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet -0.4 -1.4 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 -1.5 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 -2.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.4 +1.6 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.4 +1.5 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 +1.7 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.6 +1.3 compare
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 +1.6 compare