Fitness data for RPSI07_RS05055 in Ralstonia solanacearum PSI07

membrane protein
SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -1.9 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.3 -1.6 compare
smsa no antibiotic control SMSA no antibiotic control -0.3 -1.3 compare
cpg CPG -0.2 -1.4 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.2 -0.8 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.2 -1.2 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 -1.2 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.2 -1.1 compare
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -1.5 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -0.2 -1.1 compare
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -1.1 compare
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.8 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 +1.3 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.2 +1.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.2 +1.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 +1.4 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.3 +1.9 compare
m63_quarter_strength M63_quarter_strength +0.3 +2.1 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 +2.2 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 +2.5 compare