Fitness data for RPSI07_RS01200 in Ralstonia solanacearum PSI07

poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
SEED: Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
KEGG: biofilm PGA synthesis lipoprotein PgaB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


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group condition fitness t score  
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -1.7 compare
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 -1.7 compare
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -1.2 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 -1.5 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -1.3 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.8 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 -1.1 compare
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 -1.1 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.1 +0.9 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 +1.0 compare
xylem sap Plant=Tomato_MoneyMaker; PlantTreatment=exvivo_xylem_sap_from_healthy_plant; Sample=xylem_sap; Collection=25hr_after_growth_in_xylem_sap +0.1 +1.2 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.1 +1.1 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.1 +1.0 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.1 +1.2 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.1 +1.1 compare
smsa no antibiotic control SMSA no antibiotic control +0.2 +1.3 compare
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +1.3 compare
stress SMSA with Ralstonia_antibiotic_mix +0.2 +1.5 compare
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.2 +1.5 compare
cpg no stress control CPG no stress control +0.2 +1.5 compare