Fitness data for QEN71_RS36835 in Paraburkholderia sabiae LMG 24235

type III secretion system export apparatus subunit SctR
SEED: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
KEGG: type III secretion protein SctR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.4 -2.6 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -2.1 -1.7 compare
carbon source succinate (C) -1.9 -1.6 compare
supernatant Filtered_supernatant_MT81_in_LB -1.7 -1.2 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.6 -2.2 compare
motility Motility_outer_sample -1.2 -1.0 compare
carbon source Fumaric (C) -1.1 -1.6 compare
stress LB_noSalt with Chloride 200 mM -1.0 -1.3 compare
stress LB_noSalt with Zinc 0.5 mM -0.9 -1.3 compare
motility Motility_outer_sample -0.9 -0.9 compare
coculture Psabiae_ML3b with MT80 -0.9 -1.4 compare
stress LB_noSalt with Cobalt chloride 0.25 mM -0.9 -1.4 compare
carbon source D-Sorbitol (C) -0.7 -0.8 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 +1.1 compare
motility Motility_inner_sample +0.9 +1.8 compare
coculture Psabiae_ML3b with MT81 +0.9 +2.3 compare
carbon source L-Rhamnose (C) +0.9 +1.6 compare
carbon source L-Histidine (C) +1.0 +1.3 compare
motility Motility_inner_sample +1.2 +2.3 compare
carbon source D-Xylose (C) +1.2 +1.8 compare