Fitness data for QEN71_RS32245 in Paraburkholderia sabiae LMG 24235

RNA polymerase sigma factor
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility Motility_outer_sample_with_outgrowth -1.1 -1.8 compare
motility Motility_inner_sample -1.0 -1.8 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.9 -1.2 compare
coculture Psabiae_ML3b with MT81 -0.7 -1.5 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 -1.3 compare
carbon source L-Rhamnose (C) -0.7 -1.4 compare
carbon source D,L-Malic Acid (C) -0.7 -0.7 compare
supernatant Filtered_supernatant_MT80_in_LB -0.6 -1.3 compare
carbon source D,L-Lactate (C) -0.6 -0.8 compare
stress LB_noSalt with Cobalt chloride 0.25 mM -0.5 -1.2 compare
carbon source D-Fructose (C) -0.5 -1.0 compare
carbon source L-Leucine (C) -0.5 -1.0 compare
motility Motility_inner_sample -0.5 -0.9 compare
motility Motility_outer_sample -0.4 -0.8 compare
motility Motility_outer_sample +0.4 +0.9 compare
supernatant Filtered_supernatant_MT71_in_LB +0.5 +1.3 compare
stress LB_noSalt with Chloride 200 mM +0.7 +1.4 compare
stress LB_noSalt with Zinc 0.5 mM +0.7 +1.8 compare
carbon source succinate (C) +0.8 +2.7 compare
in planta Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.4 +1.8 compare