Fitness data for PP_5718 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Delta-Decalactone (C) -0.9 -3.1 compare
carbon source ferulate (C); with MOPS -0.8 -2.5 compare
carbon source Delta-Decalactone (C) -0.7 -2.3 compare
carbon source Delta-Nonalactone (C) -0.7 -3.0 compare
nitrogen source NAG (N); with MOPS -0.7 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
nitrogen source Propiolactam (N) -0.5 -2.4 compare
nitrogen source nitrate (N) -0.4 -1.5 compare
carbon source 1,3-Butandiol (C) +0.4 +1.5 compare
pH pH 6 +0.5 +1.7 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.5 +1.9 compare
carbon source carbon source Glycerol 108.6 mM +0.5 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.5 +1.9 compare
pH pH 5 +0.5 +2.0 compare
pH pH 8 +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +2.3 compare