Fitness data for PP_5713 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00956846: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.9 -2.0 compare
phage P. put South MOI 10 -0.7 -2.8 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.8 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.6 -2.3 compare
carbon source rac-3-Hydroxypentanoic Acid (C) -0.5 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.5 compare
pH D-Glucose (C) pH 6 -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.9 compare
carbon source Valerolactone (C) -0.4 -1.8 compare
nitrogen source nitrate (N) +0.4 +1.4 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.7 compare
carbon source Myristic (C) +0.5 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +2.5 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.6 compare
temperature Growth at 25C; with MOPS +0.5 +2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.5 +2.6 compare
nitrogen source NAG (N); with MOPS +0.5 +1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.5 +2.4 compare
nitrogen source no extra (N); with MOPS +0.5 +2.9 compare