Fitness data for PP_5705 in Pseudomonas putida KT2440

protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -5.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -5.1 -3.4 compare
carbon source 4-Aminobutyric 10 mM (C) -3.9 -2.8 compare
carbon source carbon source 4-vinylphenol 0.01 mM -2.6 -1.8 compare
nitrogen source nitrate (N) -2.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -2.4 -1.6 compare
carbon source carbon source D-Glucose 55.5 mM -2.3 -1.3 compare
carbon source D-Glucose (C) -2.1 -1.5 compare
phage P. putida South MOI 10 -2.0 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -2.0 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -1.4 compare
nitrogen source D-2-Aminobutyric (N) -1.9 -0.9 compare
nitrogen source 2,6-diaminopimelic (N) -1.8 -0.9 compare
temperature shift Temperature shift 30_to_10; with MOPS -1.6 -1.7 compare
phage P. putida Sci small MOI 0.1 +1.7 +2.4 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +2.2 +6.6 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +2.2 +6.6 compare