Fitness data for PP_5703 in Pseudomonas putida KT2440

putative type 3 effector HopPmaJ
SEED: Type III effector HopPmaJ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
carbon source Glutaric (C) -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
nitrogen source TNT (N) -0.4 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.3 compare
nitrogen source Ammonium chloride (N) -0.4 -2.1 compare
carbon source Delta-Nonalactone (C) +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +1.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.2 compare
carbon source D-Glucose (C) +0.5 +2.0 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +1.6 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare