Fitness data for PP_5681 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source nitrate (N) -2.0 -2.9 compare
carbon source Glutaric (C) -1.1 -2.5 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.0 -1.5 compare
carbon source ferulate (C); with MOPS -1.0 -1.9 compare
nitrogen source NAG (N); with MOPS -1.0 -1.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.9 -2.0 compare
carbon source Myristic (C) -0.9 -3.5 compare
carbon source Tween 20 (C) -0.9 -1.6 compare
nitrogen source Caprolactam (N) -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -2.3 compare
carbon source ferulate (C); with MOPS -0.8 -1.9 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.8 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.8 +2.9 compare
carbon source Sorghum Hydrolysate (C) +0.8 +3.9 compare
phage P. putida Missley MOI 0.1 +0.8 +2.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.8 +2.3 compare
phage P. putida PUT 7 MOI 1 +1.0 +2.6 compare