Fitness data for PP_5667 in Pseudomonas putida KT2440

putative microcin B17-like-processing protein, McbC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source nitrite (N) -1.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -1.6 compare
stress NaCl stress 250 mM -1.3 -3.1 compare
stress Butyrolactam 2 vol% -1.2 -3.5 compare
carbon source Valeric (C) -1.2 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -1.4 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.0 -1.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.0 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.9 -2.0 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.9 -2.2 compare
nitrogen source Hydantoin (N) +0.9 +3.1 compare
phage PUT8 MOI 0.1 +1.0 +2.1 compare
nitrogen source Ammonium chloride and TNT (N) +1.1 +2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS +1.1 +4.0 compare
nitrogen source TNT (N) +1.2 +3.3 compare
phage P. putida Sci small MOI 0.1 +1.4 +2.3 compare