Fitness data for PP_5633 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00958580: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.9 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.1 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.9 -1.3 compare
carbon source carbon source Bisabolene 48.9 mM -0.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -3.7 compare
stress Formaldehyde 0.03125 vol% -0.9 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -3.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.8 +2.8 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys +0.8 +2.9 compare
pH Growth at pH7 and (C) Trisodium citrate +0.8 +1.2 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.8 +1.9 compare
carbon source L-Glutamine (C) +0.9 +3.1 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.9 +1.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +0.9 +2.5 compare
carbon source L-Leucine (C) +0.9 +3.0 compare
phage P. putida Missley MOI 0.1 +1.1 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.3 compare