Fitness data for PP_5608 in Pseudomonas putida KT2440

putative exported protein
SEED: Valyl-tRNA synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
temperature shift Temperature shift 10_to_30; with MOPS -1.3 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.9 -2.7 compare
pH pH 6 -0.9 -1.9 compare
carbon source Tween 20 (C) -0.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.8 -2.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.7 -1.8 compare
nitrogen source 1,6-Hexanediamine (N) -0.7 -3.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -1.7 compare
carbon source L-Lysine (C) -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.7 -1.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.5 compare
nitrogen source nitrogen source nitrite 1mM +0.8 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.4 compare