Fitness data for PP_5589 in Pseudomonas putida KT2440

protein of unknown function containing Rhs repeat-associated core domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source nitrate (N) -2.9 -2.7 compare
carbon source Crotonic (C) -2.8 -3.3 compare
nitrogen source NAG (N); with MOPS -2.2 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6 -2.9 compare
carbon source 1,3-Butandiol (C) -1.3 -2.3 compare
carbon source Trisodium citrate (C) -1.3 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -1.2 -1.4 compare
nitrogen source NAG (N); with MOPS -1.2 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.1 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -3.5 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.1 -1.3 compare
carbon source 4-Aminobutyric 10 mM (C) -1.1 -2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.0 -1.2 compare
phage P. putida Sci Big MOI 0.1 -1.0 -1.0 compare
pH pH 6 -0.9 -1.2 compare
temperature shift Temperature shift 10_to_30; with MOPS +1.0 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +1.3 +2.1 compare