Fitness data for PP_5523 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 2-Methylbutanoic (C) -0.8 -3.0 compare
phage P. put South MOI 1 -0.8 -3.5 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.7 -2.4 compare
carbon source D-Glucose (C); with MOPS -0.7 -2.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.6 -1.9 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.6 -2.3 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.2 compare
temperature Growth at 25C -0.6 -1.8 compare
nitrogen source TNT (N) -0.6 -2.8 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.8 compare
nitrogen source TNT (N) -0.6 -2.6 compare
nitrogen source Ammonium chloride and TNT (N) -0.5 -3.2 compare
carbon source Trisodium citrate (C) -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
nitrogen source Propiolactam (N) -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.9 +2.1 compare