Fitness data for PP_5521 in Pseudomonas putida KT2440

protein of unknown function
SEED: FIG00958214: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -0.9 -2.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.5 compare
nitrogen source Uracil (N) -0.6 -3.9 compare
carbon source 1-Pentanol (C) -0.6 -4.0 compare
carbon source L-Leucine (C) -0.5 -3.3 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.6 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -2.0 compare
carbon source Nonanoic (C) -0.4 -2.5 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.6 compare
pH pH 9 +0.4 +1.9 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. +0.4 +2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.6 compare
reactor_pregrowth Adaptation in M9 media timecourse 1; day 3 +0.5 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.5 +3.1 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.5 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.3 compare
carbon source Tween 20 (C) +0.5 +2.3 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.6 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +3.4 compare