Fitness data for PP_5504 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage PUT8 MOI 0.1 -1.4 -2.5 compare
phage P. put PUT 10 MOI 10 -1.2 -1.9 compare
phage P. put PUT 10 MOI 10 -1.2 -4.7 compare
carbon source Valerolactone (C) -1.2 -2.4 compare
phage P. putida PUT10 MOI 0.1 -1.0 -4.0 compare
phage P. put PUT 10 MOI 1 -1.0 -3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.4 compare
temperature Growth at 25C -0.9 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -1.9 compare
phage P. put South MOI 1 -0.8 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.6 compare
carbon source Delta-Undecalactone (C) -0.8 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +1.7 compare
temperature Growth at 25C +0.8 +3.4 compare
phage P. putida Missley MOI 0.1 +0.8 +1.8 compare
carbon source D-Glucose (C) +0.9 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.9 +2.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +4.7 compare