Fitness data for PP_5469 in Pseudomonas putida KT2440

putative SAM-dependent methyltransferase
SEED: Methyltransferase (EC 2.1.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -1.2 -1.4 compare
pH D-Glucose (C) pH 6 -1.2 -2.6 compare
carbon source L-Leucine (C) -1.2 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.0 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.8 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.6 compare
pH D-Glucose (C) pH 6.5 -0.8 -1.5 compare
carbon source Hexanoic (C) +0.8 +2.4 compare
nitrogen source NAG (N) +0.8 +3.2 compare
phage P. putida South MOI 10 +0.8 +1.3 compare
pH Valerolactone (C) pH 6.5 +0.9 +1.9 compare
carbon source ferulate (C); with MOPS +0.9 +1.9 compare
nitrogen source nitrogen source nitrite 1mM +0.9 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.0 +1.8 compare
pH Growth at pH6 and (C) Trisodium citrate +1.0 +2.1 compare