Fitness data for PP_5456 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00954931: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
temperature Growth at 30C; with MOPS -3.8 -1.2 compare
pH Growth at pH7 and (C) D-Glucose -3.8 -1.1 compare
pH Growth at pH6 and (C) D-Glucose -3.8 -1.0 compare
no stress control Growth with no stress -3.8 -1.5 compare
pH Growth at pH8 and (C) D-Glucose -3.7 -1.2 compare
nitrogen source Urea (N); with MOPS -3.7 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.4 -1.3 compare
carbon source Tween 20 (C) -3.2 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.9 -1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 -1.4 compare
phage P. putida Sci Big MOI 0.1 -2.8 -1.1 compare
temperature shift Temperature shift 10_to_25; with MOPS -2.5 -1.3 compare
phage P. putida PUT 7 MOI 1 -2.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -1.6 compare
no phage control Time6-nophage -2.3 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.2 -1.3 compare
nitrogen source spermidine (N) -2.1 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.1 +2.4 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +2.1 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.9 +2.1 compare