Fitness data for PP_5452 in Pseudomonas putida KT2440

protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.8 -5.8 compare
nitrogen source L-Valine (N) -1.7 -5.3 compare
nitrogen source L-Valine (N) -1.7 -4.0 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.6 -3.4 compare
pH pH 7 -1.2 -3.9 compare
nitrogen source Urea (N) -0.8 -1.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.8 -2.0 compare
pH Growth at pH8 and (C) D-Glucose -0.8 -1.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.7 -1.5 compare
pH pH 5 -0.7 -2.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -1.9 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.7 -1.9 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +1.8 compare
carbon source 1,4-Butanediol (C) +0.7 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.0 compare
carbon source L-Valine (C) +0.9 +5.3 compare
carbon source L-Valine (C) +1.6 +10.4 compare
carbon source L-Valine (C) +1.7 +8.5 compare