Fitness data for PP_5407 in Pseudomonas putida KT2440

Transposition protein, TnsD-related protein
SEED: Tn7-like transposition protein D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.1 -2.8 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.8 -3.1 compare
carbon source D-Glucose (C); with MOPS -0.7 -1.9 compare
pH pH 6 -0.6 -2.6 compare
carbon source ferulate (C); with MOPS -0.6 -1.7 compare
no stress control Growth with no stress -0.6 -2.0 compare
pH pH 5 -0.6 -2.2 compare
pH Growth at pH9 and (C) D-Glucose -0.6 -3.2 compare
temperature shift Temperature shift 30_to_25 -0.6 -1.6 compare
no stress control Growth with no stress -0.5 -1.6 compare
carbon source Tween 20 (C) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.4 compare
carbon source Succinic Acid (C) +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.6 compare
carbon source Valerolactone (C) +0.5 +2.5 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.4 compare
phage P. putida Missley MOI 0.1 +0.9 +4.5 compare