Fitness data for PP_5406 in Pseudomonas putida KT2440

transposase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -0.5 -1.8 compare
carbon source ferulate (C); with MOPS -0.4 -2.1 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.4 -2.3 compare
carbon source Nonanoic (C) -0.4 -2.0 compare
carbon source acetate (C) -0.4 -1.4 compare
stress R2A with Fusaric 240 ug/mL -0.3 -2.2 compare
stress R2A with Fusaric 480 ug/mL -0.3 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.8 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 +2.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.0 compare
phage P. putida PUT 7 MOI 1 +0.7 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.0 compare
phage P. putida Missley MOI 0.1 +0.9 +5.2 compare