Fitness data for PP_5385 in Pseudomonas putida KT2440

metal RND efflux outer membrane protein, CzcC family
SEED: Heavy metal RND efflux outer membrane protein, CzcC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.4 -2.4 compare
carbon source D-Glucose (C) -1.2 -5.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.5 compare
carbon source D-Glucose (C) -0.7 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7 -2.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.7 -1.7 compare
carbon source L-Alanine (C) -0.7 -2.6 compare
stress R2A with Fusaric 240 ug/mL -0.6 -2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.5 compare
carbon source L-Leucine (C) -0.6 -2.1 compare
pH pH 4 -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.1 compare
carbon source D-Glucose (C) -0.6 -1.7 compare
carbon source L-Lysine (C) -0.6 -1.7 compare
carbon source ferulate (C); with MOPS +0.6 +2.0 compare
carbon source 3-Hydroxydecanoic (C) +0.6 +1.6 compare
phage P. putida Sci small MOI 0.1 +0.8 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +3.3 compare